Statistical Population Genomics
This open access volume presents state-of-the-art inference methods in population genomics, focusing on data analysis based on rigorous statistical techniques. After introducing general concepts related to the biology of genomes and their evolution, the book covers state-of-the-art methods for the a...
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| Format: | Electronic eBook |
| Language: | English |
| Published: |
New York, NY :
Springer US : Imprint: Humana,
2020.
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| Edition: | 1st ed. 2020. |
| Series: | Methods in Molecular Biology,
2090 |
| Subjects: | |
| Online Access: | Link to Metadata |
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Table of Contents:
- A Population Genomics Lexicon
- Processing and Analyzing Multiple Genomes Alignments with MafFilter
- Data Management and Summary Statistics with PLINK
- Exploring Population Structure with Admixture Models and Principal Components Analysis
- Detecting Positive Selection in Populations using Genetic Data
- polyDFE: Inferring the Distribution of Fitness Effects and Properties of Beneficial Mutations from Polymorphism Data
- MSMC and MSMC2: The Multiple Sequentially Markovian Coalescent.-Ancestral Population Genomics with Jocx, A Coalescent Hidden Markov Model
- Coalescent Simulation with sprime
- Inference of Ancestral Recombination Graphs using ARGweaver
- Population Genomics of Transitions to Selfing in Brassicaceae Model Systems
- Genomics of Long- and Short- Term Adaptation in Maize and Teosinte
- Neurospora from Natural Populations: Population Genomics Insights Into the Life History of a Model Microbial Eukaryote
- Population Genomics of Fungal Plant Pathogens and the Analyses of Rapidly Evolving Genome Compartments
- Population Genomics on the Fly: Recent Advances in Drosophila
- Genomic Access to the Diversity of Fishes
- Avian Population Genomics Taking Off: Latest Findings and Future Prospects
- Population Genomics of the House Mouse and the Brown Rat
- Population Genomics in the Great Apes.