singleCellBase: a high-quality manually curated database of cell markers for single cell annotation across multiple species

• Main Authors: Fan-Lin Meng (Author), Xiao-Ling Huang (Author), Wen-Yan Qin (Author), Kun-Bang Liu (Author), Yan Wang (Author), Ming Li (Author), Yong-Hong Ren (Author), Yan-Ze Li (Author), Yi-Min Sun (Author)
• Format: Book
• Published: BMC, 2023-09-01T00:00:00Z.
• Subjects: article
• Online Access: Connect to this object online.

Abstract Annotating cells in the analysis of single-cell RNA-seq (scRNA-seq) data is one of the most challenging tasks that researchers are actively addressing. Manual cell annotation is generally considered the gold standard method, although it is labor intensive and independent of prior knowledge....