The clinical and genomic distinctions of Class1/2/3 BRAF-mutant colorectal cancer and differential prognoses

Abstract BRAF mutations are the oncogenic drivers in colorectal cancer and V600 mutations (Class1), which lead to RAS-independent active monomers, are the most common mutation types. BRAF non-V600 mutants can be further classified as RAS-independent active dimers (Class2) and RAS-dependent impaired...

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Main Authors: Yungchang Chen (Author), Hao Sun (Author), Yanhong Deng (Author), Yutong Ma (Author), He Huang (Author), Yang Liu (Author), Yaru Zhang (Author), Hongyu Zhang (Author), Sheng Ye (Author), Mingyan E (Author), Hongqiang Guo (Author), Mengmeng Wu (Author), Chunman Wu (Author), Xingxiang Pu (Author), Xinggui Chen (Author), Chaoyong Liang (Author), Qiuxiang Ou (Author), Huawei Weng (Author), Xue Wu (Author), Yang Shao (Author), Anxin Gu (Author), Tongyu Lin (Author)
Format: Book
Published: BMC, 2023-01-01T00:00:00Z.
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001 doaj_b5c38b1247d04bf8a6ea1dba18368eb0
042 |a dc 
100 1 0 |a Yungchang Chen  |e author 
700 1 0 |a Hao Sun  |e author 
700 1 0 |a Yanhong Deng  |e author 
700 1 0 |a Yutong Ma  |e author 
700 1 0 |a He Huang  |e author 
700 1 0 |a Yang Liu  |e author 
700 1 0 |a Yaru Zhang  |e author 
700 1 0 |a Hongyu Zhang  |e author 
700 1 0 |a Sheng Ye  |e author 
700 1 0 |a Mingyan E  |e author 
700 1 0 |a Hongqiang Guo  |e author 
700 1 0 |a Mengmeng Wu  |e author 
700 1 0 |a Chunman Wu  |e author 
700 1 0 |a Xingxiang Pu  |e author 
700 1 0 |a Xinggui Chen  |e author 
700 1 0 |a Chaoyong Liang  |e author 
700 1 0 |a Qiuxiang Ou  |e author 
700 1 0 |a Huawei Weng  |e author 
700 1 0 |a Xue Wu  |e author 
700 1 0 |a Yang Shao  |e author 
700 1 0 |a Anxin Gu  |e author 
700 1 0 |a Tongyu Lin  |e author 
245 0 0 |a The clinical and genomic distinctions of Class1/2/3 BRAF-mutant colorectal cancer and differential prognoses 
260 |b BMC,   |c 2023-01-01T00:00:00Z. 
500 |a 10.1186/s40364-022-00443-8 
500 |a 2050-7771 
520 |a Abstract BRAF mutations are the oncogenic drivers in colorectal cancer and V600 mutations (Class1), which lead to RAS-independent active monomers, are the most common mutation types. BRAF non-V600 mutants can be further classified as RAS-independent active dimers (Class2) and RAS-dependent impaired kinase (Class3). We retrospectively reviewed the mutational profiles of 328 treatment-naïve colorectal tumors with BRAF mutations detected using capture-based hybrid next-generation sequencing targeting 400 + cancer-related genes. The clinical and genetic distinctions of patients harboring Class1/2/3 BRAF mutations were investigated, which revealed that tumors with Class1 BRAF mutations showed more unique genomic profiles than those with Class2/3 mutations. Also, by using an external dataset from cBioPortal, we demonstrated that patients with Class3 BRAF mutations had the best survival outcomes compared to the other two subgroups. These findings promoted the development of anti-BRAF strategies by distinguishing BRAF mutant subgroups.  
546 |a EN 
690 |a BRAF 
690 |a Colorectal cancer 
690 |a Next-generation sequencing 
690 |a Prognosis 
690 |a Therapeutics. Pharmacology 
690 |a RM1-950 
655 7 |a article  |2 local 
786 0 |n Biomarker Research, Vol 11, Iss 1, Pp 1-6 (2023) 
787 0 |n https://doi.org/10.1186/s40364-022-00443-8 
787 0 |n https://doaj.org/toc/2050-7771 
856 4 1 |u https://doaj.org/article/b5c38b1247d04bf8a6ea1dba18368eb0  |z Connect to this object online.