Assessment of MALDI TOF MS as alternative tool for Streptococcus suis identification
The accuracy of matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for identifying Streptococcus suis isolates obtained from pigs, wild animals and humans was evaluated using a PCR-based identification assay as the gold standard. In addition, MALDI-TOF MS was...
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Frontiers Media S.A.,
2015-08-01T00:00:00Z.
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LEADER | 00000 am a22000003u 4500 | ||
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001 | doaj_bcc78bddd2624d1b94570e010a828bb9 | ||
042 | |a dc | ||
100 | 1 | 0 | |a Marta ePerez-Sancho |e author |
700 | 1 | 0 | |a Ana Isabel Vela |e author |
700 | 1 | 0 | |a Teresa eGarcía-Seco |e author |
700 | 1 | 0 | |a Marcelo eGottschalk |e author |
700 | 1 | 0 | |a Lucas eDominguez |e author |
700 | 1 | 0 | |a JOSE FRANCISCO FERNANDEZ-GARAYZABAL |e author |
245 | 0 | 0 | |a Assessment of MALDI TOF MS as alternative tool for Streptococcus suis identification |
260 | |b Frontiers Media S.A., |c 2015-08-01T00:00:00Z. | ||
500 | |a 2296-2565 | ||
500 | |a 10.3389/fpubh.2015.00202 | ||
520 | |a The accuracy of matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for identifying Streptococcus suis isolates obtained from pigs, wild animals and humans was evaluated using a PCR-based identification assay as the gold standard. In addition, MALDI-TOF MS was compared with the commercial multi-tests Rapid ID 32 STREP system. From the 129 S. suis isolates included in the study and identified by the molecular method, only 31 isolates (24.03%) had score values ≥2.300 and 79 isolates (61.24%) gave score values between 2.299-2.000. After updating the currently available S. suis MALDI Biotyper database with the spectra of three additional clinical isolates of serotypes 2, 7 and 9, most isolates had statistically significant higher score values (mean score: 2.65) than those obtained using the original database (mean score: 2.182). Considering the results of the present study, we suggest using a less restrictive threshold score of ≥2.000 for reliable species identification of S. suis. According to this cut-off value, a total of 125 S. suis isolates (96.9%) were correctly identified using the updated database. These data indicate an excellent performance of MALDI-TOF MS for the identification of S. suis. | ||
546 | |a EN | ||
690 | |a Streptococcus suis | ||
690 | |a PCR | ||
690 | |a IDENTIFICATION | ||
690 | |a MALDI-TOF MS | ||
690 | |a biochemical markers | ||
690 | |a Public aspects of medicine | ||
690 | |a RA1-1270 | ||
655 | 7 | |a article |2 local | |
786 | 0 | |n Frontiers in Public Health, Vol 3 (2015) | |
787 | 0 | |n http://journal.frontiersin.org/Journal/10.3389/fpubh.2015.00202/full | |
787 | 0 | |n https://doaj.org/toc/2296-2565 | |
856 | 4 | 1 | |u https://doaj.org/article/bcc78bddd2624d1b94570e010a828bb9 |z Connect to this object online. |