Antimicrobial Drug-Resistant Gram-Negative Saprophytic Bacteria Isolated from Ambient, Near-Shore Sediments of an Urbanized Estuary: Absence of β-Lactamase Drug-Resistance Genes

We assessed the prevalence of antimicrobial resistance and screened for clinically relevant β-lactamase resistance determinants in Gram-negative bacteria from a large urbanized estuary. In contrast to the broad literature documenting potentially hazardous resistance determinants near wastewater trea...

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Main Authors: Charles F. Moritz (Author), Robert E. Snyder (Author), Lee W. Riley (Author), Devin W. Immke (Author), Ben K. Greenfield (Author)
Format: Book
Published: MDPI AG, 2020-07-01T00:00:00Z.
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Summary:We assessed the prevalence of antimicrobial resistance and screened for clinically relevant β-lactamase resistance determinants in Gram-negative bacteria from a large urbanized estuary. In contrast to the broad literature documenting potentially hazardous resistance determinants near wastewater treatment discharge points and other local sources of aquatic pollution, we employed a probabilistic survey design to examine ambient, near-shore sediments. We plated environmental samples from 40 intertidal and shallow subtidal areas around San Francisco Bay (California, USA) on drug-supplemented MacConkey agar, and we tested isolates for antimicrobial resistance and presence of clinically relevant β-lactamase resistance determinants. Of the 74 isolates identified, the most frequently recovered taxa were <i>Vibrio</i> spp. (40%), <i>Shewanella</i> spp. (36%), <i>Pseudomonas</i> spp. (11%), and <i>Aeromonas</i> spp. (4%). Of the 55 isolates tested for antimicrobial resistance, the <i>Vibrio</i> spp. showed the most notable resistance profiles. Most (96%) were resistant to ampicillin, and two isolates showed multidrug-resistant phenotypes: <i>V. alginolyticus</i> (cefotaxime, ampicillin, gentamicin, cefoxitin) and <i>V. fluvialis</i> (cefotaxime, ampicillin, cefoxitin). Targeted testing for class 1 integrons and presence of β-lactam-resistance gene variants TEM, SHV, OXA, CTX-M, and <i>Klebsiella pneumonia</i> carbapenemase (KPC) did not reveal any isolates harboring these resistance determinants. Thus, while drug-resistant, Gram-negative bacteria were recovered from ambient sediments, neither clinically relevant strains nor mobile β-lactam resistance determinants were found. This suggests that Gram-negative bacteria in this well-managed, urbanized estuary are unlikely to constitute a major human exposure hazard at this time.
Item Description:10.3390/antibiotics9070400
2079-6382