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Genomics-informed outbreak investigations of SARS-CoV-2 using civet

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The scale of data produced during the SARS-CoV-2 pandemic has been unprecedented, with more than 13 million sequences shared publicly at the time of writing. This wealth of sequence data provides important context for interpreting local outbreaks. However, placing sequences of interest into national...

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Main Authors: Áine O'Toole (Author), Verity Hill (Author), Ben Jackson (Author), Rebecca Dewar (Author), Nikita Sahadeo (Author), Rachel Colquhoun (Author), Stefan Rooke (Author), J. T. McCrone (Author), Kate Duggan (Author), Martin P. McHugh (Author), Samuel M. Nicholls (Author), Radoslaw Poplawski (Author), David Aanensen (Author), Matt Holden (Author), Tom Connor (Author), Nick Loman (Author), Ian Goodfellow (Author), Christine V. F. Carrington (Author), Kate Templeton (Author), Andrew Rambaut (Author)
Format: Book
Published: Public Library of Science (PLoS), 2022-01-01T00:00:00Z.
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