Recent Trends in Computational Research on Diseases

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Aquaporins: Dynamic Role and Regulation by Henry T. Nguyen

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Role of Protein-Protein Interactions in Metabolism: Genetics, Structure, Function, 2nd Edition by Michel Kranendonk

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Unraveling Neuroprotective and Neurodegenerative Signals in Neurodegeneration by Irving E. Vega

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Plant Response and Tolerance to Abiotic Oxidative Stress: Antioxidant Machinery as a Paradigm of Defense

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Plant Responses to Biotic and Abiotic Stresses: Crosstalk between Biochemistry and Ecophysiology

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The biology of the first 1000 days

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Advances in Intelligent Data Analysis XVIII 18th International Symposium on Intelligent Data Analysis, IDA 2020, Konstanz, Germany, April 27-29, 2020, Proceedings /

Table of Contents: “…Multivariate Time Series as Images: Imputation Using Convolutional Denoising Autoencoder -- Dual Sequential Variational Autoencoders for Fraud Detection -- A Principled Approach to Analyze Expressiveness and Accuracy of Graph Neural Networks -- Efficient Batch-Incremental Classification Using UMAP for Evolving Data Streams -- GraphMDL: Graph Pattern Selection Based on Minimum Description Length -- Towards Content Sensitivity Analysis -- Gibbs Sampling Subjectively Interesting Tiles -- Even Faster Exact k-Means Clustering -- Ising-Based Consensus Clustering on Special Purpose Hardware -- Transfer Learning by Learning Projections from Target to Source -- Computing Vertex-Vertex Dissimilarities Using Random Trees: Application to Clustering in Graphs -- Towards Evaluation of CNN Performance in Semantically Meaningful Latent Spaces -- Vouw: Geometric Pattern Mining Using the MDL Principle -- A Consensus Approach to Improve NMF Document Clustering -- Discriminative Bias for Learning Probabilistic Sentential Decision Diagrams -- Widening for MDL-Based Retail Signature Discovery -- Addressing the Resolution Limit and the Field of View Limit in Community Mining -- Estimating Uncertainty in Deep Learning for Reporting Confidence: An Application on Cell Type Prediction in Testes Based on Proteomics -- Adversarial Attacks Hidden in Plain Sight -- Enriched Weisfeiler-Lehman Kernel for Improved Graph Clustering of Source Code -- Overlapping Hierarchical Clustering (OHC) -- Digital Footprints of International Migration on Twitter -- Percolation-Based Detection of Anomalous Subgraphs in Complex Networks -- A Late-Fusion Approach to Community Detection in Attributed Networks -- Reconciling Predictions in the Regression Setting: an Application to Bus Travel Time Prediction -- A Distribution Dependent and Independent Complexity Analysis of Manifold Regularization -- Actionable Subgroup Discovery and Urban Farm Optimization -- AVATAR - Machine Learning Pipeline Evaluation Using Surrogate Model -- Detection ofDerivative Discontinuities in Observational Data -- Improving Prediction with Causal Probabilistic Variables -- DO-U-Net for Segmentation and Counting -- Enhanced Word Embeddings for Anorexia Nervosa Detection on Social Media -- Event Recognition Based on Classification of Generated Image Captions -- Human-to-AI Coach: Improving Human Inputs to AI Systems -- Aleatoric and Epistemic Uncertainty with Random Forests -- Master your Metrics with Calibration -- Supervised Phrase-Boundary Embeddings -- Predicting Remaining Useful Life with Similarity-Based Priors -- Orometric Methods in Bounded Metric Data -- Interpretable Neuron Structuring with Graph Spectral Regularization -- Comparing the Preservation of Network Properties by Graph Embeddings -- Making Learners (More) Monotone -- Combining Machine Learning and Simulation to a Hybrid Modelling Approach -- LiBRe: Label-Wise Selection of Base Learners in Binary Relevance for Multi-Label Classification -- Angle-Based Crowding Degree Estimation for Many-Objective Optimization.…”
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Ontogeny and Phylogeny of Brain Barrier Mechanisms by Shane A. Liddelow

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The biology of the first 1000 days

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Biotechnologies for Plant Mutation Breeding Protocols /

Table of Contents: “….) -- Optimization of Somatic Embryogenesis in Cassava -- Creation of a TILLING Population in Barley after Chemical Mutagenesis with Sodium Azide and MNU -- Site-Directed Mutagenesis in Barley by Expression of TALE Nuclease in Embryogenic Pollen -- Doubled Haploidy as a Tool for Chimera Dissolution of TALEN-Induced Mutations in Barley -- Field Evaluation of Mutagenized Rice Material -- Root Phenotyping Pipeline for Cereal Plants -- Breeding New Aromatic Rice with High Iron using Gamma Radiation and Hybridization -- Utilizing NIRS for Qualitative and Non-Destructive Identification of Seed Mutants in Large Populations -- Protocols for Proteome Analyses of Jatropha curcas -- Low-Cost Methods for DNA Extraction and Quantification -- A Protocol for Benchtop Extraction of Single-Strand-Specific Nucleases for Mutation Discovery -- A Protocol for Validation of Doubled Haploid Plants by Enzymatic Mismatch Cleavage -- Bioinformatics-Based Assessment of the Relevance of Candidate Genes for Mutation Discovery -- Mutation Detection by Analysis of DNA Heteroduplexes in TILLING Populations of Diploid Species -- Determining Mutation Density using Restriction Enzyme Sequence Comparative Analysis (RESCAN) -- Next-Generation Sequencing for Targeted Discovery of Rare Mutations in Rice.…”
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Sexual Reproduction in Animals and Plants

Table of Contents: “…Chandler) -- 5 Structure, Function and Phylogenetic Consideration of Calaxin (Kazuo Inaba) -- 6 Cl- Channels and Transporters in Sperm Physiology (Alberto Darszon) -- 7 Equatorin-related Subcellular and Molecular Events During Sperm Priming for Fertilization in Mice (Kiyotaka Toshimori) -- 8 Acrosome Reaction-mediated Motility Initiation that is Critical for the Internal Fertilization of Urodele Amphibians (Akihiko Watanabe) -- 9 Analysis of the Mechanism that Brings Protein Disulfide Isomerase-P5 to Inhibit Oxidative Refolding of Lysozyme (Miho Miyakawa) -- Part 2 Gametogenesis, Gamete Recognition, Activation, and Evolution -- 10 Effect of Relaxin-like Gonad-Stimulating Substance (GSS) on Gamete Shedding and 1-Methyladenine Production in Starfish Ovaries (Masatoshi Mita) -- 11 Incapacity of 1-Methyladenine Production to Relaxin-like Gonad-Stimulating Substance (GSS) in Ca2+-free Seawater-treated Starfish Ovarian Follicle Cells (Masatoshi Mita) -- 12 Novel Isoform of Vitellogenin Expressed in Eggs is a Binding Partner of the Sperm Proteases, HrProacrosin and HrSermosin, in the Ascidian Halocynthia roretzi (Hitoshi Sawada) -- 13 Actin Cytoskeleton and Fertilization in Starfish Eggs (Luigia Santella) -- 14 Focused Proteomics on Egg Membrane Microdomains to Elucidate the Cellular and Molecular Mechanisms of Fertilization in the African Clawed Frog Xenopus laevis (Ken-ichi Sato) -- 15 Egg Activation in Polyspermy: Its Molecular Mechanisms and Evolution in Vertebrates (Yasuhiro Iwao ) -- 16 ATP Imaging in Xenopus laevis Oocyte (Takashi Ijiri) -- 17 Mitochondrial Activation and Nitric Oxide (NO) Release at Fertilization in Echinoderm Eggs (Tatsuma Mohri) -- 18 Functional Roles of Spe Genes in the Male Germline During Reproduction of Caenorhabditis elegans (Hitoshi Nishimura) -- 19 Origin of Female/Male Gender as Deduced by the Mating Type Loci of the Colonial Volvocalean Greens (Hisayoshi Nozaki) -- Part 3 Allorecognition in Male-Female Interaction -- 20 Allorecognition and Lysin Systems During Ascidian Fertilization (Hitoshi Sawada) -- 21 Self-incompatibility in the Brassicaceae (Megumi Iwano) -- 22 Signalling Events in Pollen Acceptance or Rejection in the Arabidopsis Species (Daphne R. …”
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Advances in Wheat Genetics: From Genome to Field Proceedings of the 12th International Wheat Genetics Symposium /

Table of Contents: “….: morphology, hybrid sterility and gametocidal genes -- Part III Cytogenetics and Allopolyploid Evolution -- 7 Wheat chromosome analysis -- 8 New aneuploids of common wheat -- 9 Chromosomal changes over the course of polyploid wheat evolution and domestication -- Part IV Toward Whole Genome Sequencing -- 10 Comprehensive functional analysesof expressed sequence tags in common wheat -- 11 Development of the BAC physical maps of wheat chromosome 6B for its genomic sequencing -- Part V Structural and Functional Genomics -- 12 Sequencing of wheat chromosome 6B: toward functional genomics -- 13 Genetic mechanisms of vernalization requirement duration in winter wheat cultivars -- 14 Building ultra-dense genetic maps in the presence of genotyping errors and missing data -- Part VI Functional Gene Analysis and Molecular Tools -- 15 Exploiting comparative biology and genomics to understand a trait in wheat, Ph1 -- 16 The specific features of anthocyanin biosynthesis regulation in wheat -- 17 Association of wheat miRNAs with hybrid incompatibility in interspecific crosses of Triticum and Aegilops -- 18 High efficiency wheat transformation mediated by Agrobacterium tumefaciens -- 19 extra early-flowering (exe) mutants in einkorn wheat generated by heavy-ion beam irradiation -- Part VII Biotic Stress Response -- 20 Stem rust resistance - two approaches -- 21 Germplasm enhancement for resistance to Pyrenophora tritici-repentis in wheat -- 22 Next Generation Sequencing enabled genetics in hexaploid wheat -- Part VIII Abiotic Stress Response -- 23 Genomics approaches to dissect the genetic basis of drought resistance in durum wheat -- 24 Hybrid breeding in wheat -- 25 Broadening the genetic diversity of common and durum wheat for abiotic stress tolerance breeding -- 26 Early maturity in wheat for adaptation to high temperature stress -- 27 Gene expression profiles involved in development of freezing tolerance in common wheat -- Part IX Improvement of Grain Quality -- 28 Coping with wheat quality in a changing environment - Proteomics evidence for stress caused by environmental changes -- 29 Starch modification: a model for wheat MAS breeding -- 30 Quality characteristics of soft kernel durum - a new cereal crop -- 31 Proposal of international gluten research group -- 32 Enlargement of the genetic diversity for grain quality in bread wheat through alien introgression -- 33 Complex G x E interactions and QTL clusters govern end-use quality traits in hexaploid wheat -- 34 A consistent QTL for flour yield on chromosome 3B in the soft winter wheat variety, Kitahonami -- Part X Marker-Assisted Breeding -- 35 Recent improvements in Japanese wheat varieties -- 36 Determining the order of resistance genes Qsng-3BS, Fhb1 and Sr2 and combining them in coupling on wheat chromosome 3BS -- 37 Meta-analysis of resistance to Fusarium head blight in tetraploid wheat - implications for durum wheat breeding -- 38 Interest of a multiparental and outcrossing wheat population for fine mapping -- 39 The effect of Earliness per se (Eps) genes on flowering time in bread wheat -- Part XI Toward Sustainable Wheat Production -- 40 Recapitulating the OECD-CRP session (sponsored by the OECD's Co-operative Research Program on Biological Resource Management for Sustainable Agricultural Systems -- 41 Exploring genetic resources to increase adaptation of wheat to climate change -- 42 Genomic approaches towards durable fungal disease resistance in wheat -- 43 Review and new progress in wheat wide hybridization for improving the resistance to biotic and abiotic stresses -- 44 Global crop improvement networks to bridge technology gaps -- 45 Genomic selection in plants: empirical results and implications for wheat breeding -- 46 Dietary fibre: wheat genes for enhanced human health -- BM Appendix I: Program -- Appendix II: Poster Presentation List -- Appendix III: Committees.…”
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IJERPH 15th Anniversary

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Biomineralization From Molecular and Nano-structural Analyses to Environmental Science /

Table of Contents: “…Structure and analysis of biominerals -- 1 On the transition temperature to calcite and cell lengths for various biogenic aragonite -- 2 TEM study of the radular teeth of the chiton Acanthopleura japonica -- 3 Experimental cremation of bone - crystallite size and lattice parameter evolution -- 4 Effect of carbonic anhydrase immobilized on eggshell membranes on calcium carbonate crystallization in vitro -- 5 Proteomic Analysis of Venomous Fang Matrix Proteins of Protobothrops flavoviridis (Habu) Snake -- 6 Characterization of goldfish scales by vibrational spectroscopic analyses -- 7 Relationship between Bone Morphology and Bone Quality in Female Femurs: Implication for Additive Risk of Alternative Forced Molting -- 8 Spectroscopic investigation of shell pigments from the family Neritidae (Mollusca: Gastropoda) -- 9 3D visualization of calcified and non-calcified molluscan tissues using computed tomography -- Part II Molecular and cellular regulation of biomineralization -- 10 Calcium Ion and Mineral Pathways in Biomineralization: a Perspective -- 11 Identification of barnacle shell proteins by transcriptome and proteomic approaches -- 12 The optical characteristics of cultured Akoya pearl are influenced by both donor and recipient oysters -- 13 Influence of B vitamins on proliferation and differentiation of osteoblastic bovine cell cultures; an in vitro study -- 14 Rice plant biomineralization: Electron microscopic study on plant opals and exploration of organic matrices involved in biosilica formation -- 15 DMP1 binds specifically to type I collagen and regulates mineral nucleation and growth -- 16 Exploration of genes associated with sponge silicon biomineralization in the whole genome sequence of the hexactinellid Euplectella curvistellata -- Part III Genome-based analysis of biomineralization -- 17 The origin and early evolution of SCPP genes and tissue mineralization in vertebrates -- Part IV Evolution in biomineralization -- 18 Immunolocalization of enamel matrix protein-like proteins in the tooth enameloid of actinopterygian bony fish -- 19 Geographical and seasonal variations of the shell microstructures in the bivalve Scapharca broughtonii -- Part V Biomineralization in medical and dental sciences -- 20 Enhancement of bone tissue repair by octacalcium phosphate crystallizing into hydroxyapatite in situ -- 21 The relationship between the structure and calcification of dentin and the role of melatonin -- 22 Fabrication of hydroxyapatite nanofibers with high aspect ratio vialow-temperature wet precipitation methods under acidic conditions -- 23 Physico-chemical characterisation of the processes involved in enamel remineralisation by CPP-ACP -- 24 Molecular Interactions of Peptide Encapsulated Calcium Phosphate Delivery Vehicle at Enamel Surfaces -- 25 Preparation of random and aligned polycaprolactone fiber as template for classical calcium oxalate through electrocrystallization -- Part VI Bio-inspired materials science and engineering -- 26 Dysprosium biomineralization by acidophilic fungus Penidiella sp. strain T9 and its application for metal recovery -- 27 Various shapes of gold nanoparticles synthesized by glycolipids extracted from Lactobacillus casei -- 28 Octacalcium phosphate overgrowth on b-tricalcium phosphate substrate in metastable calcium phosphate solution -- Part VII Biominerals for environmental and paleoenvironmental sciences -- 29 Coral-based approaches to paleoclimate studies, future ocean environment assessment, and disaster research -- 30 An elemental fractionation mechanism common to biogenic calcium carbonate -- 31 Biomineralization of metallic tellurium by bacteria isolated from deep marine sediment in Niigata Bay Japan -- 32 Calcium oxalate crystals in plant communities of the southeast of the Pampean Plain, Argentina -- 33 Iron and calcium biomineralizations in the Pampean coastal plains, Argentina: their role in the environmental reconstruction of the Holocene -- Part VIII Mollusk shell formation -- 34 Skeletal organic matrices in molluscs: origin, evolution, diagenesis -- 35 Functional Analysis on Shelk2 of Pacific Oyster -- 36 Mollusk shells: Does the nacro-prismatic "model" exist? …”
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Whole-Body Regeneration Methods and Protocols /

Table of Contents: “…-Studying Tunicata WBR using Botrylloides anceps -- In Situ Hybridization to Identify Stem Cells in the Freshwater Sponge Ephydatia fluviatilis -- Isolation and Maintenance of In Vitro Cell Cultures from the Ctenophore Mnemiopsis leidyi -- Analysis of Spatial Gene Expression at the Cellular Level in Stony Corals -- Studying Stem Cell Biology in Intact and Whole-Body Regenerating Hydra by Flow Cytometry -- Non-Invasive Intra-Vascular Micro-Transfusion in Colonial Tunicates -- Gene Manipulation in Hydractinia -- Manipulation of Gene Activity in the Regenerative Model Sea Anemone, Nematostella vectensis -- Monitoring Telomere Maintenance during Regeneration of Annelids -- Analysis of DNA Double Stranded Breaks using the COMET Assay in Planarians -- Random Integration Transgenesis in a Free-Living Regenerative Flatworm Macrostomum lignano -- RNAi Screening to Assess Tissue Regeneration in Planarians -- Monitoring Chromatin Regulation in Planarians using Chromatin Immunoprecipitation followed by Sequencing (ChIP-seq) -- Assessing Chromatin Accessibility during WBR in Acoels -- Single Cell Transcriptomic Analysis in the Regenerating Cnidarian Nematostella vectensis -- Characterization of Soluble Cell-Free Coelomic Fluid Proteome from the Starfish Marthasterias glacialis -- Using RNA-Sequencing for Transcriptome Profiling of Botrylloides sp. …”
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Systems Biology Approaches to Understanding the Cause and Treatment of Heart, Lung, Blood, and Sleep Disorders by Pankaj Qasba

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Molecular Mechanism and Application of Somatic Cell Cloning in Mammals

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Advanced Topics in Neurological Disorders

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Proteoforms Concept and Applications in Medical Sciences

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