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1841
New Mechanism Explanation, Emergence and Reduction /
Published 2024Table of Contents: “…Organisms need mechanisms; Mechanisms need organisms (William Bechtel and Leonardo Bich) -- Chapter 6. Searching for protein folding mechanisms: on the insoluble contrast between thermodynamic and kinetic explanatory approaches (Gabriel Vallejos and Davide Vecchi) -- Chapter 7. …”
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1842
Sublinear Computation Paradigm Algorithmic Revolution in the Big Data Era /
Published 2022Table of Contents: “…-- Chapter 2: Property Testing on Graphs and Games -- Chapter 3: Constant-Time Algorithms for Continuous Optimization Problems -- Chapter 4: Oracle-based Primal-Dual Algorithms for Packing and Covering Semidefinite Programs -- Chapter 5: Almost Linear Time Algorithms for Some Problems on Dynamic Flow Networks -- Chapter 6: Sublinear Data Structure -- Chapter 7: Compression and Pattern Matching -- Chapter 8: Orthogonal Range Search Data Structures -- Chapter 9: Enhanced RAM Simulation in Succinct Space -- Chapter 10: Review of Sublinear Modeling in Markov Random Fields by Statistical-Mechanical Informatics and Statistical Machine Learning Theory -- Chapter 11: Empirical Bayes Method for Boltzmann Machines -- Chapter 12: Dynamical analysis of quantum annealing -- Chapter 13: Mean-field analysis of Sourlas codes with adiabatic reverse annealing -- Chapter 14: Rigidity theory for protein function analysis and structural accuracy validations -- Chapter 15: Optimization of Evacuating and Walking Home Routes from Osaka City with Big Road Network Data on Nankai Megathrust Earthquake -- Chapter 16: Stream-based Lossless Data Compression.…”
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1843
Cross-linking of gelatin using plant phenolics for gelatin fabrication
Published 2013Get full text
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1846
Evolutionary Genomics Statistical and Computational Methods /
Published 2019Table of Contents: “…Asexual Species -- Selection Acting on Genomes -- Looking for Darwin in Genomic Sequences: Validity and Success Depends on the Relationship between Model and Data -- Evolution of Viral Genomes: Interplay between Selection, Recombination, and Other Forces -- Evolution of Protein Domain Architectures -- New Insights on the Evolution of GenomeContent: Population Dynamics of Transposable Elements in Flies and Humans -- Association Mapping and Disease: Evolutionary Perspectives -- Ancestral Population Genomics -- Introduction to the Analysis of Environmental Sequences: Metagenomics with MEGAN -- Multiple Data Analyses and Statistical Approaches for Analyzing Data from Metagenomic Studies and Clinical Trials -- Systems Genetics for Evolutionary Studies -- Analyzing Epigenome Data in Context of Genome Evolution and Human Diseases -- Semantic Integration and Enrichment of Heterogeneous Biological Databases -- High-Performance Computing in Bayesian Phylogenetics and Phylodynamics Using BEAGLE -- Scalable Workflows and Reproducible Data Analysis for Genomics -- Sharing Programming Resources between Bio* Projects.…”
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1847
The roles of notch signaling pathway in regulating macrophage functions
Published 2011Get full text
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1851
Etiology and Morphogenesis of Congenital Heart Disease From Gene Function and Cellular Interaction to Morphology /
Published 2016Table of Contents: “…-- The multiple roles of prostaglandin E2 in the regulation of the ductus arteriosus -- Developmental Differences in the Maturation of Sarcoplasmic Reticulum and Contractile Proteins in Large Blood Vessels Influences Their Contractility -- Fetal and Neonatal Ductus Arteriosus is Regulated with ATP-sensitive Potassium Channel -- Part VIII. …”
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1854
Sexual Reproduction in Animals and Plants
Published 2014Table of Contents: “…Franklin-Tong ) -- 24 S-RNase-based Self-incompatibility in Petunia: A Complex Non-self Recognition System Between Pollen and Pistil (Teh-hui Kao) -- 25 Self-incompatibility System of Ipomoea trifida, a Wild-type Sweet Potato (Tohru Tsuchiya) -- Part 4 Male-Female Interaction and Gamete Fusion -- 26 Profiling the GCS1-based Gamete Fusion Mechanism (Toshiyuki Mori) -- 27 Fertilization Mechanisms of the Rodent Malarial Parasite Plasmodium berghei (Makoto Hirai) -- 28 Sexual Reproduction of a Unicellular Charophycean Alga, Closterium peracerosum-strogosum-littorale Complex (Hiroyuki Sekimoto) -- 29 Fertilization of Brown Algae: Flagellar Function in Phototaxis and Chemotaxis (Taizo Motomura ) -- 30 Gene and Protein Expression Profiles in Rice Gametes and Zygotes: A Cue for Understanding the Mechanisms of Gametic and Early Zygotic Development in Angiosperms (Takashi Okamoto) -- 31 Role of CD9 in Sperm-Egg Fusion and Virus-induced Cell Fusion in Mammals (Kenji Miyado) -- 32 The Mechanism of Sperm-Egg Fusion in Mouse and the Involvement of IZUMO1 (Naokazu Inoue) -- 33 A ZP2 Cleavage Model of Gamete Recognition and the Post-fertilization Block to Polyspermy (Jurrien Dean) -- 34 Involvement of Carbohydrate Residues of the Zona Pellucida in In Vitro Sperm Recognition in Pigs and Cattle (Naoto Yonezawa) -- Part 5 Organella, Proteolysis, and New Techniques -- 35 The Role of Peroxisomes in Plant Reproductive Processes (Shoji Mano) -- 36 Regulation of Vacuole-mediated Programmed Cell Death During Innate Immunity and Reproductive Development in Plants (Tomoko Koyano) -- 37 Sperm Proteasomes as a Putative Egg Coat Lysin in Mammals (Peter Sutovsky) -- 38 Germline Transformation in the Ascidian Ciona intestinalis (Yasunori Sasakura) -- BM Index. .…”
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1857
A Roadmap for Plant Genome Editing
Published 2024Table of Contents: “…Section 0- Editorial -- Section 1- Plant breeding and Technological Advances -- Chapter 1 Genome editing of gene families for crop improvement -- Chapter 2 Base editing and Prime editing -- Chapter 3 Novel delivery methods for CRISPR-based plant genome editing + Figure -- Chapter 4 Balancing trait improvement with tradeoff side-effects using genome editing technology -- Chapter 5 CRISPR/Cas mutation screening: from mutant allele detection to prediction of protein coding potential -- Chapter 6 Methods and techniques to select efficient and specific guides for CRISPR-mediated genome editing in plants -- Section 2- Applications of Genome Editing -- Chapter 7 Genome editing of a macroalgae with possible global impacts -- Chapter 8 A Short Review of Advances in Plant-Based Antigen Production Strategies and the Production of Viral Vaccine Antigens Derived from CRISPR/Cas9 Genome Edited Nicotiana benthamiana Plants for Enhanced Vaccine Efficacy -- Chapter 9 Precise gene editing of cereals using CRISPR/Cas technology -- Chapter 10 Implementing genome editing in barley breeding -- Chapter 11 Current status and future prospective of genome editing application in maize -- Chapter 12 Using gene editing strategies for wheat improvement -- Chapter 13 Gene Editing of Wheat to Reduce Coeliac Disease Epitopes in Gluten -- Chapter 14 Genome Editing in Horticultural Plants: Present Applications and Future Perspective -- Chapter 15 Application of CRISPR/Cas-mediated genome editing techniques in leguminous crops -- Chapter 16 Genetic improvement in leguminous crops through genome editing -- Chapter 17 Soybean improvement and the role of gene editing -- Chapter 18 Oilseed rape (Brassica napus L.) …”
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1858
Organic Chemistry with a Biological Emphasis
Published 2016Table of Contents: “…Chapter 9: Phosphate transfer reactions -- Section 1: Overview of phosphate groups -- Section 2: Phosphate transfer reactions - an overview -- Section 3: ATP, the principal phosphate group donor -- Section 4: Phosphorylation of alcohols -- Section 5: Phosphorylation of carboxylates -- Section 6: Hydrolysis of organic phosphates -- Section 7: Phosphate diesters in DNA and RNA -- Section 8: The organic chemistry of genetic engineering -- Chapter 10: Nucleophilic carbonyl addition reactions -- Section 1: Nucleophilic additions to aldehydes and ketones: an overview -- Section 2: Hemiacetals, hemiketals, and hydrates -- Section 3: Acetals and ketals -- Section 4: N-glycosidic bonds -- Section 5: Imines -- Section 5: A look ahead: addition of carbon and hydride nucleophiles to carbonyls -- Chapter 11: Nucleophilic acyl substitution reactions -- Section 1: Carboxylic acid derivatives -- Section 2: The nucleophilic acyl substitution mechanism -- Section 3: The relative reactivity of carboxylic acid derivatives -- Section 4: Acyl phosphates -- Section 5: Formation of thioesters, esters, and amides -- Section 6: Hydrolysis of thioesters, esters, and amides -- Section 7: Protein synthesis on the ribosome -- Section 8: Nucleophilic substitution at activated amides and carbamides -- Section 9: Nucleophilic acyl substitution reactions in the laboratory -- Section 10: A look ahead: acyl substitution reactions with a carbanion or hydride ion nucleophile -- Chapter 12: Reactions at the α-carbon, part I -- Section 1: Review of acidity at the α-carbon -- Section 2: Isomerization at the α-carbon -- Section 3: Aldol addition -- Section 4: α-carbon reactions in the synthesis lab - kinetic vs. thermodynamic alkylation products -- Interchapter: Predicting multistep pathways - the retrosynthesis approachChapter 13: Reactions at the α-carbon, part II -- Section 1: Decarboxylation -- Section 2: An overview of fatty acid metabolism -- Section 3: Claisen condensation -- Section 4: Conjugate addition and elimination -- Section 5: Carboxylation -- Chapter 14: Electrophilic reactions -- Section 1: Electrophilic addition to alkenes -- Section 2: Elimination by the E1 mechanism -- Section 3: Electrophilic isomerization -- Section 4: Electrophilic substitution -- Section 5: Carbocation rearrangements -- Chapter 15: Oxidation and reduction reactions -- Section 1: Oxidation and reduction of organic compounds - an overview -- Section 2: Oxidation and reduction in the context of metabolism -- Section 3: Hydrogenation of carbonyl and imine groups -- Section 4: Hydrogenation of alkenes and dehydrogenation of alkanes -- Section 5: Monitoring hydrogenation and dehydrogenation reactions by UV spectroscopy -- Section 6: Redox reactions of thiols and disulfides -- Section 7: Flavin-dependent monooxygenase reactions: hydroxylation, epoxidation, and theBaeyer-Villiger oxidation -- Section 8: Hydrogen peroxide is a harmful 'Reactive Oxygen Species' -- Chapter 16: Radical reactions -- Section 1: Overview of single-electron reactions and free radicals -- Section 2: Radical chain reactions -- Section 3: Useful polymers formed by radical chain reactions -- Section 4: Destruction of the ozone layer by a radical chain reaction -- Section 5: Oxidative damage to cells, vitamin C, and scurvy -- Section 6: Flavin as a one-electron carrier -- Chapter 17: The organic chemistry of vitamins -- Section 1: Pyridoxal phosphate (Vitamin B6) -- Section 2: Thiamine diphosphate (Vitamin B1) -- Section 3: Thiamine diphosphate, lipoamide and the pyruvate dehydrogenase reaction -- Section 4: Folate…”
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1859
Food Studies Matter, Meaning, Movement
Published 2022Table of Contents: “…Susan Willis Chan -- Creative: Ode to Pollinators, Andrea Elena Noriega -- Case: Community Gardens; Howard Rosing, Ben Helphand, and Amy DeLorenzo -- Case: Backyard Chickens, Johanna Wilkes -- Creative: Ode to Nature, Andrea Elena Noriega -- Perspective: Fisheries, Kristen Lowitt -- Creative: Foood Tarot Toolkit, Markéta Dolejšová -- Perspective: Digital Agriculture, Mascha Gugganig and Kelly Bronson -- Case: Food Traceability, Blue Miaoran Dong -- Case: Food Safety Act, Amanda Shankland -- Creative: A Last Supper, Stephanie Couey -- Case: Meat in Literature, Stephanie Couey -- Perspective: Meat and Materiality, Kristie O'Neill -- Case: Food and Art, Edward Whittall -- Perspective: Sustainable Protein; Ryan Katz-Rosene, Andrew Heffernan, and Anil Arora -- Perspective: Eating Insects, Laura Shine -- Case: Veganism and Morality, Melissa Montanari -- Creative: Herding Humans, Annika Walsh -- Glossary -- Recommended Citations -- --…”
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1860
Anatomy and Physiology 2e
Published 2021Table of Contents: “…The Cellular Level of Organization -- 3.1 The Cell Membrane -- 3.2 The Cytoplasm and Cellular Organelles -- 3.3 The Nucleus and DNA Replication -- 3.4 Protein Synthesis -- 3.5 Cell Growth and Division -- 3.6 Cellular Differentiation -- Chapter 4. …”
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