Virus Bioinformatics

• Main Author: Robertson, David (auth)
• Other Authors: Hufsky, Franziska (auth), Ibrahim, Bashar (auth), Marz, Manja (auth)
• Format: Electronic Book Chapter
• Language: English
• Published: MDPI - Multidisciplinary Digital Publishing Institute 2020
• Subjects: Biology, life sciences; BBB; recombination; software; APMV; AquaDiva; horizontal gene transfer; sequence interpretation; structurally homogenous; CVI988/Rispens; DFT; eukaryogenesis; fluorescent reporter protein; parallel reaction monitoring; transcriptomics; splicing; Rickettsia; minor capsid protein; flavivirus; DWT; RNA viruses; data compression; DNA replication; influenza A; virus diagnostics; quasispecies; mRNA structure; systems virology; virus bioinformatics; metagenomics; drug resistance; nasopharynx; image quantification; infection; primary B cells; non-coding RNA; transcriptome; RB1B; virus; interferon-stimulated genes (ISG); pandoravirus; virus-host interaction; secondary structure; bivalve; ICP0; assembly; MSA; variant calling; translation machinery; gram-positive bacteria; virosphere; viral mRNA; NCLDV; sncRNA; structurally related; cellular immunity; Amebae viruses; genome evolution; groundwater; capsid protein; HPV58; RNA structure; polyomavirus; Mimivirus; PAA; honey bees; Hepatitis C virus; compressive genomics; Yellow Fever Virus; poxvirus; ADAR; virome; endogenous viral elements; giant virus; structure database; RNA-seq; deep sequencing; viral evolution; bovine soft palate; deformed wing virus; virus-to-host gene transfer; ASFV; virus proteomics; RNAi; polycistronic viral transcripts; complex networks analysis; mimivirus; TLR agonist; time series; mRNA families; foot-and-mouth disease virus (FMDV); comparative genomics; virus dynamics modeling; viral metagenome; subVOG; bioinformatics; viral taxonomy; sequencing library preparation; virus classification; alignment; targeted proteomics; prophylaxis; bacteriophage; dsdna viruses; taxonomic classification; Marek's disease virus (MDV); Coxsackievirus B4; hepatitis C virus; mass spectrometry; data transformation; Base-By-Base; data analysis; peptide selection; proteomics; mitochondria; Drosophila; ori; HMM; codon frequency distribution; RNAseq; protein domains; innate immune system; tobacco mosaic virus; apiary pests; virology; virus genomics; chemical organization theory; aquifer
• Online Access: DOAB: download the publication; DOAB: description of the publication

Virus bioinformatics is evolving and succeeding as an area of research in its own right, representing the interface of virology and computer science. Bioinformatic approaches to investigate viral infections and outbreaks have become central to virology research, and have been successfully used to de...